STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc39a7Solute carrier family 39 member 7. (461 aa)    
Predicted Functional Partners:
LOC114855673
Protein transport protein Sec61 subunit alpha-like 1.
   
  
 0.684
LOC114856187
Protein transport protein Sec61 subunit alpha-like 1.
   
  
 0.684
slc30a7
Solute carrier family 30 member 7.
  
 0.660
slc30a5
Solute carrier family 30 member 5.
  
 0.659
slc30a6
Solute carrier family 30 member 6.
  
 0.650
cwc27
CWC27 spliceosome associated cyclophilin.
      0.647
hsd17b8
Hydroxysteroid 17-beta dehydrogenase 8.
    
 0.633
pfdn6
Prefoldin subunit 6.
   
  
 0.617
SLC39A11
Solute carrier family 39 member 11.
    
 
 0.595
slc30a9
Solute carrier family 30 member 9.
     
 0.587
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.