STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114851888Protein FAM214A-like. (1146 aa)    
Predicted Functional Partners:
zfand2a
Zinc finger AN1-type containing 2A.
      
 0.528
WDR7
WD repeat domain 7.
      
 0.512
rsl24d1
Ribosomal L24 domain containing 1.
      
 0.499
capsl
Calcyphosine like.
      
 0.468
pigo
Phosphatidylinositol glycan anchor biosynthesis class O.
      
 0.433
hmg20b
High mobility group 20B.
      
 0.424
mblac1
Metallo-beta-lactamase domain containing 1.
      
 0.414
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.