STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859916ADP-ribosylation factor-like protein 5B. (180 aa)    
Predicted Functional Partners:
LOC114852798
Intersectin-2-like.
    
 0.892
itsn2
Intersectin 2.
    
 0.892
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.840
copg2
Coatomer protein complex subunit gamma 2.
    
 0.837
itsn1
Intersectin 1.
    
 0.830
arfgap1
ADP ribosylation factor GTPase activating protein 1.
   
 0.816
copb1
Coatomer protein complex subunit beta 1.
   
 0.782
ap1b1
Adaptor related protein complex 1 subunit beta 1.
   
 0.775
LOC114869082
AP-1 complex subunit beta-1.
   
 0.775
gak
Cyclin G associated kinase.
    
 0.771
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.