STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
endovEndonuclease V. (351 aa)    
Predicted Functional Partners:
ppox
Protoporphyrinogen oxidase.
  
 
 0.985
hmbs
Hydroxymethylbilane synthase.
  
 0.978
cpox
Coproporphyrinogen oxidase.
  
 0.939
fech
Ferrochelatase.
  
  
 0.927
uros
Uroporphyrinogen III synthase.
  
 
 0.924
iyd
Iodotyrosine deiodinase.
    
 0.888
LOC114868028
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like.
    
  0.853
cth
Cystathionine gamma-lyase.
    
 0.836
mocs1
Molybdenum cofactor synthesis 1.
    
  0.830
rnls
Renalase, FAD dependent amine oxidase.
     
 0.809
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.