STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpaf1ATP synthase mitochondrial F1 complex assembly factor 1. (345 aa)    
Predicted Functional Partners:
atpaf2
ATP synthase mitochondrial F1 complex assembly factor 2.
   
 
 0.777
LOC114870420
ATP synthase subunit beta, mitochondrial.
    
 
 0.657
LOC114847642
ATP synthase subunit beta, mitochondrial-like.
    
 
 0.657
cdca8
Cell division cycle associated 8.
    
 
 0.640
pum2
Pumilio RNA binding family member 2.
    
 
 0.615
pum1
Pumilio RNA binding family member 1.
    
 
 0.615
palb2
Partner and localizer of BRCA2.
   
    0.602
ndufab1
NADH:ubiquinone oxidoreductase subunit AB1.
   
    0.602
mrpl27
Mitochondrial ribosomal protein L27.
   
    0.596
atp5f1c
ATP synthase F1 subunit gamma.
   
  
 0.595
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.