STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114860992Protein PET100 homolog, mitochondrial. (67 aa)    
Predicted Functional Partners:
NDUFB1
NADH:ubiquinone oxidoreductase subunit B1.
   
  
 0.859
ndufb4
NADH:ubiquinone oxidoreductase subunit B4.
   
    0.838
ndufa2
NADH:ubiquinone oxidoreductase subunit A2.
   
    0.708
LOC114847640
Cytochrome c oxidase copper chaperone.
   
  
 0.708
LOC114867091
Cytochrome b-c1 complex subunit 9.
   
  
 0.649
pum2
Pumilio RNA binding family member 2.
    
 
 0.638
pum1
Pumilio RNA binding family member 1.
    
 
 0.638
PET117
Protein PET117 homolog, mitochondrial.
   
  
 0.599
suox
Sulfite oxidase.
      
 0.553
ENSBSLP00000037535
annotation not available
      
 0.535
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.