STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114854727SEC14-like protein 1. (736 aa)    
Predicted Functional Partners:
sumf1
Sulfatase modifying factor 1.
    
  0.600
ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
  0.547
ugt8
UDP glycosyltransferase 8.
     
 0.509
PPTC7
PTC7 protein phosphatase homolog.
   
   0.499
LOC114866831
Protein phosphatase PTC7 homolog.
   
   0.499
LOC114848971
Phospholipase D1-like.
   
 
 0.479
LOC114869510
Phospholipase D1-like.
   
 
 0.479
LOC114852912
Phospholipase D1-like.
   
 
 0.479
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.477
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta.
    
 
 0.476
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (30%) [HD]