STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000033390annotation not available (499 aa)    
Predicted Functional Partners:
shoc2
SHOC2 leucine rich repeat scaffold protein.
    
  0.821
LOC114860657
Serine/threonine-protein phosphatase alpha-2 isoform-like.
   
 0.813
ppp1cc
Protein phosphatase 1 catalytic subunit gamma.
   
 0.813
LOC114846088
Serine/threonine-protein phosphatase alpha-2 isoform-like.
   
 0.813
ppp1r42
Protein phosphatase 1 regulatory subunit 42.
    
  0.806
ubxn10
UBX domain protein 10.
   
    0.749
ENSBSLP00000024151
annotation not available
    
 0.731
bmt2
Base methyltransferase of 25S rRNA 2 homolog.
    
 0.731
ENSBSLP00000027616
annotation not available
    
 0.731
LOC114843883
netrin-G1-like.
    
 0.716
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.