STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865714Cellular retinoic acid-binding protein 2-like. (144 aa)    
Predicted Functional Partners:
LOC114844674
Gastrotropin-like.
   
 
 0.669
fabp1
Fatty acid binding protein 1.
     
 0.639
FABP6
Gastrotropin-like.
     
 0.630
ppard
Peroxisome proliferator activated receptor delta.
    
 0.546
LOC114846450
Cytochrome P450 26A1.
   
 
 0.530
LOC114870374
Fatty acid-binding protein, intestinal-like.
  
  
0.527
LOC114865871
Fatty acid-binding protein, liver-like.
     
0.509
LOC114855454
Fatty acid-binding protein, intestinal-like.
     
0.505
LOC114846262
Cytochrome P450 26B1.
   
 
 0.505
LOC114865425
Hormone-sensitive lipase-like.
   
 0.494
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.