STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bmpr1aBone morphogenetic protein receptor type 1A. (539 aa)    
Predicted Functional Partners:
bmp4
Bone morphogenetic protein 4.
    
 0.970
LOC114848128
Activin receptor type-1-like.
  
 
0.964
bmp2
Bone morphogenetic protein 2.
    
 0.962
LOC114867783
Bone morphogenetic protein 2-like.
    
 0.957
LOC114848498
Growth/differentiation factor 6-A-like.
    
 0.943
gdf5
Growth differentiation factor 5.
    
 0.937
LOC114856215
Growth/differentiation factor 5-like.
    
 0.937
LOC114843718
Growth/differentiation factor 6-A-like.
    
 0.937
bmpr2
Bone morphogenetic protein receptor type 2.
   
0.934
bmp6
Bone morphogenetic protein 6.
    
 0.934
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.