STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114860264Cdc42 effector protein 1-like. (332 aa)    
Predicted Functional Partners:
LOC114869235
Rho-related GTP-binding protein RhoG-like.
    
 0.560
LOC114864564
Rho-related GTP-binding protein RhoG-like.
    
 0.560
rhoh
Ras homolog family member H.
    
 0.541
rhoq
Ras homolog family member Q.
    
 0.541
LOC114855655
Cell division control protein 42 homolog.
    
 0.521
LOC114859401
Cell division control protein 42 homolog.
    
 0.521
dock4
Dedicator of cytokinesis 4.
     
 0.495
LOC114842974
Cell division control protein 42 homolog.
    
 0.453
LOC114866173
Cell division control protein 42 homolog.
    
 0.453
LOC114868529
Cdc42 effector protein 2-like.
     
0.430
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.