STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem248Transmembrane protein 248. (341 aa)    
Predicted Functional Partners:
MAP2K6
Dual specificity mitogen-activated protein kinase kinase 6-like.
    
 0.685
kctd7
Potassium channel tetramerization domain containing 7.
 
      0.500
dctn4
Dynactin subunit 4.
  
    0.472
skp1
S-phase kinase associated protein 1.
  
   
 0.447
rb1cc1
RB1 inducible coiled-coil 1.
  
    0.441
mkx
Mohawk homeobox.
  
     0.424
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
   
 
  0.412
bub3
BUB3 mitotic checkpoint protein.
     
 0.403
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.