STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSRB1methionine-R-sulfoxide reductase B1-A-like. (92 aa)    
Predicted Functional Partners:
ENSBSLP00000044258
annotation not available
  
 
 0.764
msra
Methionine sulfoxide reductase A.
  
 
 0.764
mrpl20
Mitochondrial ribosomal protein L20.
   
 
 0.763
LOC114847215
Thioredoxin domain-containing protein 3 homolog.
  
 0.759
LOC114867580
Thioredoxin-like.
   
 0.734
LOC114867589
Thioredoxin-like.
   
 0.734
mrpl11
Mitochondrial ribosomal protein L11.
   
 
 0.654
mrpl33
Mitochondrial ribosomal protein L33.
   
 
 0.654
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.652
FXN
Frataxin.
    
 
 0.652
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.