STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcnpPEST proteolytic signal containing nuclear protein. (225 aa)    
Predicted Functional Partners:
c9h12orf65
Chromosome 9 C12orf65 homolog.
      
 0.529
LOC114859294
Prostaglandin E synthase 3-like.
   
    0.526
ptges3
Prostaglandin E synthase 3.
   
    0.526
dnph1
2'-deoxynucleoside 5'-phosphate N-hydrolase 1.
      
 0.526
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
    
 
 0.490
uhrf1
Ubiquitin like with PHD and ring finger domains 1.
    
 
 0.490
poli
DNA polymerase iota.
      
 0.434
ube3c
Ubiquitin protein ligase E3C.
      
 0.424
c6h11orf58
Chromosome 6 C11orf58 homolog.
   
    0.422
mycbp2
MYC binding protein 2.
      
 0.420
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.