STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114851227Microtubule-associated tumor suppressor 1 homolog. (1169 aa)    
Predicted Functional Partners:
dctn2
Dynactin subunit 2.
    
 0.626
mtor
Mechanistic target of rapamycin kinase.
   
 0.622
bub3
BUB3 mitotic checkpoint protein.
    
 0.622
smg1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
   
  0.603
LOC114849834
Microtubule-associated protein RP/EB family member 3-like.
    
 
 0.576
mapre2
Microtubule associated protein RP/EB family member 2.
    
 
 0.576
ENSBSLP00000046343
annotation not available
    
 
 0.576
mapre1
Microtubule associated protein RP/EB family member 1.
    
 
 0.576
LOC114859056
DNA (cytosine-5)-methyltransferase 3B-like.
    
 
 0.576
LOC114848682
Microtubule-associated protein RP/EB family member 3-like.
    
 
 0.576
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.