STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114864991Transmembrane emp24 domain-containing protein 11-like. (221 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
0.988
ENSBSLP00000001947
annotation not available
   
0.969
tmed2
Transmembrane p24 trafficking protein 2.
   
0.969
LOC114862140
Transmembrane emp24 domain-containing protein 7-like.
   
0.908
LOC114845051
TIR domain-containing adapter molecule 1-like.
   
 0.908
surf4
Surfeit 4.
   
 0.865
copb1
Coatomer protein complex subunit beta 1.
   
 0.750
cope
Coatomer protein complex subunit epsilon.
   
  0.727
COPB2
Coatomer protein complex subunit beta 2.
    
  0.702
LOC114844930
Coatomer subunit beta.
    
  0.702
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.