STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nol11Nucleolar protein 11. (755 aa)    
Predicted Functional Partners:
utp4
UTP4 small subunit processome component.
    
 0.996
wdr43
WD repeat domain 43.
   
 0.988
utp15
UTP15 small subunit processome component.
   
 0.982
wdr75
WD repeat domain 75.
   
 0.981
nop56
NOP56 ribonucleoprotein.
   
 0.957
rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
  0.946
utp6
UTP6 small subunit processome component.
   
 0.943
utp20
UTP20 small subunit processome component.
   
 0.939
mphosph10
M-phase phosphoprotein 10.
   
 0.938
wdr3
WD repeat domain 3.
   
 0.937
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.