STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
foxd1Forkhead box D1. (346 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
     
 0.755
sgk3
Serum/glucocorticoid regulated kinase family member 3.
    
 0.656
slc45a2
Solute carrier family 45 member 2.
    
 
 0.599
LOC114862140
Transmembrane emp24 domain-containing protein 7-like.
    
  0.562
LOC114845051
TIR domain-containing adapter molecule 1-like.
    
  0.562
sirt1
Sirtuin 1.
    
 0.560
SIRT5
Sirtuin 5.
    
 0.558
sting1
Stimulator of interferon response cGAMP interactor 1.
    
  0.540
slc45a1
Solute carrier family 45 member 1.
    
 
 0.527
asxl2
ASXL transcriptional regulator 2.
    
 0.525
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.