STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dusp23Dual specificity phosphatase 23. (151 aa)    
Predicted Functional Partners:
LOC114859067
Serine/threonine-protein kinase 38.
   
 0.860
stk38l
Serine/threonine kinase 38 like.
   
 0.860
espl1
Extra spindle pole bodies like 1, separase.
   
 0.847
anapc1
Anaphase promoting complex subunit 1.
    
 0.756
cdc27
Cell division cycle 27.
  
 0.751
cdc16
Cell division cycle 16.
    
 0.744
cdc20b
Cell division cycle 20B.
  
 0.741
LOC114844051
Fizzy-related protein homolog.
  
 0.741
intu
Inturned planar cell polarity protein.
  
 0.741
cdc20
Cell division cycle 20.
  
 0.741
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.