STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114859257Serine/threonine-protein kinase pim-2-like. (318 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2 group IVA.
    
 0.789
ripk4
Receptor interacting serine/threonine kinase 4.
    
0.575
LOC114870611
Peripheral plasma membrane protein CASK-like.
   
0.566
cask
Calcium/calmodulin dependent serine protein kinase.
   
0.566
LOC114861437
Serine/threonine-protein kinase Chk2-like.
  
 
0.524
SLC39A1
Solute carrier family 39 member 1.
    
 0.518
LOC114852049
Zinc transporter ZIP1-like.
    
 0.518
SLC39A3
Solute carrier family 39 member 3.
    
 0.518
LOC114858494
Mitogen-activated protein kinase 13-like.
  
 
0.491
prkn
Parkin RBR E3 ubiquitin protein ligase.
    
  0.482
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.