STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddx24DEAD-box helicase 24. (826 aa)    
Predicted Functional Partners:
rbm28
RNA binding motif protein 28.
   
 
 0.990
LOC114867891
WD repeat-containing protein 74-like.
   
 0.989
ddx18
DEAD-box helicase 18.
  
 
0.987
wdr12
WD repeat domain 12.
   
 0.985
rbm34
RNA binding motif protein 34.
   
 0.981
pum3
Pumilio RNA binding family member 3.
   
 0.980
ebna1bp2
EBNA1 binding protein 2.
   
 0.979
ddx56
DEAD-box helicase 56.
  
 
0.978
ddx52
DExD-box helicase 52.
  
0.975
noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
 0.975
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.