Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ccdc112 | nexmif | ENSBSLP00000012414 | ENSBSLP00000035703 | Coiled-coil domain containing 112. | Neurite extension and migration factor. | 0.435 |
ccdc112 | rlim | ENSBSLP00000012414 | ENSBSLP00000035686 | Coiled-coil domain containing 112. | Ring finger protein, LIM domain interacting. | 0.403 |
cop1 | ephx4 | ENSBSLP00000028667 | ENSBSLP00000015240 | COP1 E3 ubiquitin ligase. | Epoxide hydrolase 4. | 0.420 |
cop1 | nexmif | ENSBSLP00000028667 | ENSBSLP00000035703 | COP1 E3 ubiquitin ligase. | Neurite extension and migration factor. | 0.438 |
ephx4 | cop1 | ENSBSLP00000015240 | ENSBSLP00000028667 | Epoxide hydrolase 4. | COP1 E3 ubiquitin ligase. | 0.420 |
ephx4 | nexmif | ENSBSLP00000015240 | ENSBSLP00000035703 | Epoxide hydrolase 4. | Neurite extension and migration factor. | 0.407 |
nexmif | ccdc112 | ENSBSLP00000035703 | ENSBSLP00000012414 | Neurite extension and migration factor. | Coiled-coil domain containing 112. | 0.435 |
nexmif | cop1 | ENSBSLP00000035703 | ENSBSLP00000028667 | Neurite extension and migration factor. | COP1 E3 ubiquitin ligase. | 0.438 |
nexmif | ephx4 | ENSBSLP00000035703 | ENSBSLP00000015240 | Neurite extension and migration factor. | Epoxide hydrolase 4. | 0.407 |
nexmif | rlim | ENSBSLP00000035703 | ENSBSLP00000035686 | Neurite extension and migration factor. | Ring finger protein, LIM domain interacting. | 0.588 |
rlim | ccdc112 | ENSBSLP00000035686 | ENSBSLP00000012414 | Ring finger protein, LIM domain interacting. | Coiled-coil domain containing 112. | 0.403 |
rlim | nexmif | ENSBSLP00000035686 | ENSBSLP00000035703 | Ring finger protein, LIM domain interacting. | Neurite extension and migration factor. | 0.588 |