STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr92WD repeat domain 92. (360 aa)    
Predicted Functional Partners:
pih1d1
PIH1 domain containing 1.
    
 0.995
rpap3
RNA polymerase II associated protein 3.
   
 0.995
uxt
Ubiquitously expressed prefoldin like chaperone.
   
 0.994
ENSBSLP00000035474
annotation not available
 
  
 0.989
LOC114857896
Calcineurin subunit B type 1.
 
  
 0.987
pfdn2
Prefoldin subunit 2.
    
 0.986
uri1
URI1 prefoldin like chaperone.
    
 0.985
ruvbl2
RuvB like AAA ATPase 2.
   
 0.985
POLR2E
RNA polymerase II subunit E.
    
 0.975
pdrg1
P53 and DNA damage regulated 1.
    
 0.974
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.