STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
e4f1E4F transcription factor 1. (780 aa)    
Predicted Functional Partners:
anks3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
   0.787
wdr24
WD repeat domain 24.
   
 
  0.778
brat1
BRCA1 associated ATM activator 1.
   
    0.736
zgpat
Zinc finger CCCH-type and G-patch domain containing.
   
   0.733
ENSBSLP00000005240
Si:ch73-174h16.4.
   
    0.627
telo2
Telomere maintenance 2.
   
    0.613
ENSBSLP00000048337
annotation not available
    
  0.578
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.564
sprtn
SprT-like N-terminal domain.
    
 
 0.550
mms19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 
 0.535
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.