STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114848027Four and a half LIM domains protein 2-like. (281 aa)    
Predicted Functional Partners:
traf6
TNF receptor associated factor 6.
    
 0.725
LOC114868611
Segment polarity protein dishevelled homolog DVL-3-like.
    
 0.641
dvl2
Dishevelled segment polarity protein 2.
    
 0.641
dvl1
Dishevelled segment polarity protein 1.
    
 0.641
dvl3
Dishevelled segment polarity protein 3.
    
 0.641
VANGL1
VANGL planar cell polarity protein 1.
    
 0.633
LOC114851078
Vang-like protein 2.
    
 0.633
LOC114847419
Vang-like protein 1.
    
 0.633
ENSBSLP00000047503
annotation not available
    
 0.633
LOC114844689
Vang-like protein 2.
    
 0.633
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.