STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcsk5Proprotein convertase subtilisin/kexin type 5. (1801 aa)    
Predicted Functional Partners:
frem1
FRAS1 related extracellular matrix 1.
    
 0.855
rxfp2
Relaxin family peptide receptor 2.
  
 0.760
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
  
 0.760
rxfp1
Relaxin family peptide receptor 1.
  
 0.760
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
  
 0.760
LOC114867748
Transforming growth factor beta-1 proprotein-like.
    
 0.639
pomc
Proopiomelanocortin.
     
 0.627
ENSBSLP00000010368
annotation not available
     
 0.607
naga
alpha-N-acetylgalactosaminidase.
   
 0.569
gla
Galactosidase alpha.
   
 0.569
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.