STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyglGlycogen phosphorylase L. (954 aa)    
Predicted Functional Partners:
gbe1
1,4-alpha-glucan branching enzyme 1.
 
 0.987
LOC114844675
Glycogen debranching enzyme-like.
  
 0.987
LOC114844395
Phosphoglucomutase-1-like.
  
 
 0.978
otc
Ornithine carbamoyltransferase.
  
 
 0.978
LOC114862632
Phosphoglucomutase-like protein 5.
  
 
 0.959
LOC114860817
Glycogen [starch] synthase, muscle-like.
  
 0.931
LOC114861320
Glycogen [starch] synthase, liver-like.
  
 0.931
LOC114842036
UTP--glucose-1-phosphate uridylyltransferase-like.
  
 
 0.926
LOC114845152
Pancreatic alpha-amylase-like.
  
 0.920
ephx2
Epoxide hydrolase 2.
  
 
 0.889
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.