STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhdc4Kelch domain containing 4. (584 aa)    
Predicted Functional Partners:
utp6
UTP6 small subunit processome component.
   
    0.694
cebpz
CCAAT enhancer binding protein zeta.
   
    0.638
rbm28
RNA binding motif protein 28.
   
    0.615
rpf2
Ribosome production factor 2 homolog.
   
    0.610
grwd1
Glutamate rich WD repeat containing 1.
   
    0.610
gcc1
GRIP and coiled-coil domain containing 1.
    
   0.542
ncoa6
Nuclear receptor coactivator 6.
    
   0.542
pno1
Partner of NOB1 homolog.
    
   0.542
LOC114867891
WD repeat-containing protein 74-like.
   
    0.519
shcbp1
SHC binding and spindle associated 1.
      
 0.495
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.