STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arfgap1ADP ribosylation factor GTPase activating protein 1. (415 aa)    
Predicted Functional Partners:
arfgap3
ADP ribosylation factor GTPase activating protein 3.
   
0.976
arfgap2
ADP ribosylation factor GTPase activating protein 2.
   
0.976
SMAP1
Stromal membrane-associated protein 1-like.
    
0.899
LOC114865790
Stromal membrane-associated protein 2-like.
    
0.899
LOC114870468
Stromal membrane-associated protein 1-like.
    
0.899
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.870
copg2
Coatomer protein complex subunit gamma 2.
   
 0.840
cope
Coatomer protein complex subunit epsilon.
   
 0.835
LOC114856920
Uncharacterized LOC114856920.
    
 0.818
arl1
ADP ribosylation factor like GTPase 1.
    
 0.818
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.