STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sordSorbitol dehydrogenase. (354 aa)    
Predicted Functional Partners:
stx18
Syntaxin 18.
     
 0.957
xylb
Xylulokinase.
  
 
 0.950
rbm45
RNA binding motif protein 45.
  
 0.950
gosr2
Golgi SNAP receptor complex member 2.
     
 0.947
napg
NSF attachment protein gamma.
     
 0.947
stx16
Syntaxin 16.
     
 0.942
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.940
adhfe1
Alcohol dehydrogenase iron containing 1.
  
 
 0.940
galm
Galactose mutarotase.
  
 
 0.939
bckdha
Branched chain keto acid dehydrogenase E1 subunit alpha.
  
 
 0.939
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.