STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex13Peroxisomal biogenesis factor 13. (421 aa)    
Predicted Functional Partners:
pex14
Peroxisomal biogenesis factor 14.
   
 0.999
pex19
Peroxisomal biogenesis factor 19.
    
 0.999
pex12
Peroxisomal biogenesis factor 12.
   
 0.995
pex10
Peroxisomal biogenesis factor 10.
    
 0.992
scp2
Sterol carrier protein 2.
   
 
 0.991
LOC114853152
Non-specific lipid-transfer protein-like.
   
 
 0.991
fam185a
Family with sequence similarity 185 member A.
   
 0.989
eci2
enoyl-CoA delta isomerase 2.
   
 0.988
hsdl2
Hydroxysteroid dehydrogenase like 2.
   
 
 0.985
ephx2
Epoxide hydrolase 2.
    
 0.984
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.