STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114847618Protein starmaker-like. (686 aa)    
Predicted Functional Partners:
cd2
CD2 molecule.
   
0.986
ENSBSLP00000051837
annotation not available
   
 0.986
apaf1
Apoptotic peptidase activating factor 1.
   
 0.774
fancm
FA complementation group M.
    
 0.761
pold2
DNA polymerase delta 2, accessory subunit.
    
 0.761
arid4b
AT-rich interaction domain 4B.
    
  0.718
arid4a
AT-rich interaction domain 4A.
    
  0.718
LOC114863042
Survival motor neuron protein 1-like.
    
 0.716
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
    
 0.709
pold1
DNA polymerase delta 1, catalytic subunit.
   
 0.701
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.