STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865369Na(+)/H(+) exchanger beta-like. (721 aa)    
Predicted Functional Partners:
chp1
Calcineurin like EF-hand protein 1.
   
 0.888
LOC114848356
Ezrin-like.
    
 0.859
LOC114869326
Moesin-like.
    
 0.859
EZR
Ezrin.
    
 0.859
rock2
Rho associated coiled-coil containing protein kinase 2.
  
 0.859
rock1
Rho associated coiled-coil containing protein kinase 1.
  
 0.859
LOC114849611
Rho-associated protein kinase 2-like.
  
  0.853
ENSBSLP00000014214
annotation not available
   
 
 0.847
LOC114864638
Moesin-like.
    
 0.847
SLC9A1
Sodium/hydrogen exchanger 1-like.
  
  
 
0.841
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.