STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b4galnt1beta-1,4-N-acetyl-galactosaminyltransferase 1. (555 aa)    
Predicted Functional Partners:
st8sia1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1.
    
 0.891
b4galt7
Beta-1,4-galactosyltransferase 7.
    
 0.879
st3gal5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5.
    
 0.866
LOC114856783
Beta-hexosaminidase subunit alpha-like.
     
 0.860
hexb
Hexosaminidase subunit beta.
     
 0.860
slc33a1
Solute carrier family 33 member 1.
     
 0.847
ENSBSLP00000036924
beta-1,4-N-acetyl-galactosaminyl transferase 1a.
  
  
 
0.842
st8sia5
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5.
    
 0.841
LOC114842080
Lactosylceramide alpha-2,3-sialyltransferase-like.
    
 0.840
LOC114860601
Alpha-2,8-sialyltransferase 8F-like.
    
 0.837
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.