STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865399c-Myc-binding protein-like. (106 aa)    
Predicted Functional Partners:
lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.893
wdr90
WD repeat domain 90.
    
   0.849
mycbpap
MYCBP associated protein.
    
 
 0.764
pgk1
Phosphoglycerate kinase 1.
    
 
 0.709
spag17
Sperm associated antigen 17.
    
 
 0.664
cfap69
Cilia and flagella associated protein 69.
    
   0.652
ENSBSLP00000039806
annotation not available
    
   0.652
polr3c
RNA polymerase III subunit C.
    
   0.652
taf5
TATA-box binding protein associated factor 5.
    
   0.611
taf5l
TATA-box binding protein associated factor 5 like.
    
   0.611
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.