STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114865573Neurocalcin-delta B. (219 aa)    
Predicted Functional Partners:
LOC114870611
Peripheral plasma membrane protein CASK-like.
    
 0.804
cask
Calcium/calmodulin dependent serine protein kinase.
    
 0.804
LOC114866086
Phosphatidylinositol 4-kinase beta-like.
    
 
 0.702
LOC114843221
Phosphatidylinositol 4-kinase beta-like.
    
 
 0.702
chp1
Calcineurin like EF-hand protein 1.
    
0.701
myo3a
Myosin IIIA.
    
 0.670
LOC114846828
ranBP2-like and GRIP domain-containing protein 3.
  
 0.650
RYR3
Ryanodine receptor 3-like.
    
 0.641
LOC114866502
Glutamate receptor ionotropic, NMDA 1.
   
 0.629
wdr90
WD repeat domain 90.
    
 
 0.625
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.