STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858003SLIT-ROBO Rho GTPase-activating protein 1-like. (1089 aa)    
Predicted Functional Partners:
LOC114852798
Intersectin-2-like.
   
 0.892
itsn2
Intersectin 2.
   
0.892
itsn1
Intersectin 1.
   
0.803
LOC114855655
Cell division control protein 42 homolog.
    
 0.687
LOC114859401
Cell division control protein 42 homolog.
    
 0.687
gas7
Growth arrest specific 7.
    
 0.686
ENSBSLP00000041863
annotation not available
    
 0.686
LOC114861783
Neural Wiskott-Aldrich syndrome protein-like.
   
 0.638
was
WASP actin nucleation promoting factor.
   
 0.638
ENSBSLP00000039151
annotation not available
   
 0.638
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.