STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114870392Homeobox protein Meis1. (427 aa)    
Predicted Functional Partners:
yap1
Yes associated protein 1.
    
 0.899
tshz3
Teashirt zinc finger homeobox 3.
   
 0.884
LOC114857714
Teashirt homolog 3-like.
   
 0.884
LOC114853505
pre-B-cell leukemia transcription factor 1.
   
0.820
LOC114842605
pre-B-cell leukemia transcription factor 1-like.
   
0.820
LOC114860986
pre-B-cell leukemia transcription factor 1-like.
   
0.820
pbx3
PBX homeobox 3.
   
0.820
LOC114844734
pre-B-cell leukemia transcription factor 1.
   
0.820
LOC114860546
Homeobox protein Hox-B13a.
    
 
 0.741
dlx3
Distal-less homeobox 3.
    
 
 0.701
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.