STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep164Centrosomal protein 164. (825 aa)    
Predicted Functional Partners:
cep83
Centrosomal protein 83.
    
 0.973
sclt1
Sodium channel and clathrin linker 1.
   
 0.969
fbf1
Fas binding factor 1.
   
 
 0.965
ENSBSLP00000036449
Ninein (GSK3B interacting protein).
    
 0.965
LOC114852313
Centrosomal protein of 89 kDa-like.
     
 0.964
cenpf
Centromere protein F.
     
 0.929
ninl
Ninein like.
    
 0.887
odf2
Outer dense fiber of sperm tails 2.
    
 0.886
LOC114843948
Outer dense fiber protein 2-like.
    
 0.886
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.869
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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