STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114858216Protein bicaudal D homolog 2-like. (901 aa)    
Predicted Functional Partners:
dctn2
Dynactin subunit 2.
    
 0.905
LOC114851040
Dynactin subunit 1-like.
    
 0.898
dync1li2
Dynein cytoplasmic 1 light intermediate chain 2.
    
 0.832
LOC114865782
Cytoplasmic dynein 1 light intermediate chain 1-like.
    
 0.832
LOC114853623
Ras-related protein Rab-6B.
    
 0.789
rab41
RAB41, member RAS oncogene family.
    
 0.789
LOC114844746
Ras-related protein Rab-6B-like.
    
 0.789
rab6a
RAB6A, member RAS oncogene family.
    
 0.789
fam193a
Family with sequence similarity 193 member A.
    
 0.783
fam193b
Family with sequence similarity 193 member B.
    
 0.783
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.