STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sugt1SGT1 homolog, MIS12 kinetochore complex assembly cochaperone. (340 aa)    
Predicted Functional Partners:
hsp90ab1
Heat shock protein 90 alpha family class B member 1.
   
 0.984
hsp90b1
Heat shock protein 90 beta family member 1.
   
 0.984
LOC114849323
Heat shock protein HSP 90-alpha 1.
   
 0.984
trap1
TNF receptor associated protein 1.
   
 0.973
tsc1
TSC complex subunit 1.
   
 0.973
skp1
S-phase kinase associated protein 1.
   
 
 0.969
LOC114847886
Cysteine and histidine-rich domain-containing protein 1-like.
   
0.965
chordc1
Cysteine and histidine rich domain containing 1.
   
 0.965
ENSBSLP00000008247
annotation not available
   
 0.964
nod1
Nucleotide binding oligomerization domain containing 1.
    
 0.905
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.