STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSBSLP00000037368annotation not available (549 aa)    
Predicted Functional Partners:
lum
Lumican.
   
  0.754
LOC114855699
Protein disulfide-isomerase-like.
   
  0.622
plod2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.621
plod1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.621
serpinh1
Serpin family H member 1.
    
 0.605
LOC114869545
Serpin H1-like.
    
 0.605
COL22A1
Collagen type XXII alpha 1 chain.
 
 
0.604
p4hb
Prolyl 4-hydroxylase subunit beta.
   
  0.602
tep1
Telomerase associated protein 1.
    
 0.588
ppib
Peptidylprolyl isomerase B.
     
 0.583
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.