STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114855264Fer-1-like protein 4. (2057 aa)    
Predicted Functional Partners:
LOC114855702
Caveolin-2-like.
    
 0.583
nfs1
NFS1 cysteine desulfurase.
      
 0.539
LOC114857390
OTU domain-containing protein 7A-like.
      
 0.532
glrx5
Glutaredoxin 5.
      
 0.497
ENSBSLP00000040982
Vesicle-associated membrane protein 1.
     
 0.466
ENSBSLP00000044597
Zgc:92912.
     
 0.466
ENSBSLP00000055743
Vesicle-associated membrane protein 2.
     
 0.466
LOC114856106
Caveolin-3-like.
   
 0.448
llgl2
LLGL scribble cell polarity complex component 2.
      
 0.441
ENSBSLP00000045577
PRKR interacting protein 1.
      
 0.437
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.