STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGFB1I1Transforming growth factor beta 1 induced transcript 1. (475 aa)    
Predicted Functional Partners:
LOC114857634
Alpha-parvin.
   
 0.906
LOC114841762
Adenosine kinase-like.
   
 0.888
vcl
Vinculin.
   
 0.888
LOC114867082
ARF GTPase-activating protein GIT2-like.
    
 0.834
git1
GIT ArfGAP 1.
    
 0.834
git2
GIT ArfGAP 2.
    
 0.834
parvg
Parvin gamma.
   
 0.829
LOC114851144
Protein-tyrosine kinase 2-beta-like.
    
 0.827
ptk2b
Protein tyrosine kinase 2 beta.
    
 0.827
LOC114865544
Focal adhesion kinase 1-like.
    
 0.827
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.