STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPCAT1Lysophosphatidylcholine acyltransferase 1. (540 aa)    
Predicted Functional Partners:
lpcat3
Lysophosphatidylcholine acyltransferase 3.
     
 0.879
chpt1
Choline phosphotransferase 1.
     
 0.878
lpcat4
Lysophosphatidylcholine acyltransferase 4.
  
 
0.877
crls1
Cardiolipin synthase 1.
  
 0.876
LOC114869510
Phospholipase D1-like.
    
 0.867
pla2g7
Phospholipase A2 group VII.
     
 0.866
cept1
Choline/ethanolamine phosphotransferase 1.
     
 0.865
LOC114856852
Group XV phospholipase A2-like.
    
 0.863
lpgat1
Lysophosphatidylglycerol acyltransferase 1.
     
 0.860
pemt
Phosphatidylethanolamine N-methyltransferase.
     
 0.860
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.