STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
piwil1Piwi like RNA-mediated gene silencing 1. (857 aa)    
Predicted Functional Partners:
tdrd1
Tudor domain containing 1.
   
 0.915
LOC114849159
Tudor domain-containing protein 6-like.
   
 0.894
LOC114848635
Tudor domain-containing protein 6-like.
   
 0.894
tdrkh
Tudor and KH domain containing.
   
 0.883
ENSBSLP00000046968
Si:dkeyp-93d12.1.
   
 0.867
rnf17
Ring finger protein 17.
   
 0.846
tdrd5
Tudor domain containing 5.
   
 0.818
ENSBSLP00000048273
Exonuclease 3'-5' domain containing 1.
   
 
 0.812
snd1
Staphylococcal nuclease and tudor domain containing 1.
   
 0.803
LOC114851041
Tudor domain-containing protein 7B-like.
   
 0.792
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.