STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114860854Interferon-induced protein 44-like. (272 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
   0.855
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.691
mrpl22
Mitochondrial ribosomal protein L22.
   
 
 0.688
mrpl33
Mitochondrial ribosomal protein L33.
   
 
 0.685
mrpl43
Mitochondrial ribosomal protein L43.
   
   0.683
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.682
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.679
LOC114857384
39S ribosomal protein L23, mitochondrial-like.
   
 
 0.677
mrps6
Mitochondrial ribosomal protein S6.
   
   0.675
mrpl3
Mitochondrial ribosomal protein L3.
   
 
 0.674
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.