STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ercc6l2ERCC excision repair 6 like 2. (1256 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.950
ruvbl1
RuvB like AAA ATPase 1.
    
 0.915
ruvbl2
RuvB like AAA ATPase 2.
   
 0.913
actl6a
Actin like 6A.
   
 0.910
pcna
Proliferating cell nuclear antigen.
  
 0.900
trrap
Transformation/transcription domain associated protein.
   
 0.898
actr5
Actin related protein 5.
    
 0.895
fancm
FA complementation group M.
  
 0.889
rad18
RAD18 E3 ubiquitin protein ligase.
   
 0.878
meaf6
MYST/Esa1 associated factor 6.
    
 0.876
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.