STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htra1HtrA serine peptidase 1. (485 aa)    
Predicted Functional Partners:
scp2
Sterol carrier protein 2.
    
 0.985
LOC114853152
Non-specific lipid-transfer protein-like.
    
 0.985
xiap
X-linked inhibitor of apoptosis.
    
 0.920
pink1
PTEN induced kinase 1.
    
 0.870
psmd1
Proteasome 26S subunit, non-ATPase 1.
    
 0.865
LOC114858414
Baculoviral IAP repeat-containing protein 7-like.
    
 0.840
LOC114869611
Inhibitor of apoptosis protein-like.
    
 0.840
birc6
Baculoviral IAP repeat containing 6.
    
 0.834
LOC114859194
Baculoviral IAP repeat-containing protein 5.1-like.
    
 0.832
LOC114846480
Baculoviral IAP repeat-containing protein 5.2-like.
    
 0.832
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.