STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114866780Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A-like. (649 aa)    
Predicted Functional Partners:
LOC114843239
Phosphatidylinositide phosphatase SAC1-B.
 
  
 0.930
sacm1l
SAC1 like phosphatidylinositide phosphatase.
 
  
 0.884
INPP5A
Inositol polyphosphate-5-phosphatase A.
     
 0.854
plcg1
Phospholipase C gamma 1.
   
 0.843
plce1
Phospholipase C epsilon 1.
     
 0.842
LOC114861520
Type I inositol 1,4,5-trisphosphate 5-phosphatase-like.
     
 0.841
inpp1
Inositol polyphosphate-1-phosphatase.
    
 0.836
ipmk
Inositol polyphosphate multikinase.
     
 0.820
LOC114867542
Inositol-trisphosphate 3-kinase C-like.
     
 0.819
LOC114848432
Inositol-trisphosphate 3-kinase A-like.
     
 0.819
Your Current Organism:
Betta splendens
NCBI taxonomy Id: 158456
Other names: B. splendens, Siamese fighting fish
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